Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903678.1_cds_XP_016453766.1_47859
CDS Infomation

[gene=LOC107778090] [db_xref=GeneID:107778090] [protein=probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3] [protein_id=XP_016453766.1] [location=join(540..590,2170..2228,2351..2441,3490..3544,3671..3761,3855..4077,4159..4339,5119..5309,5882..6118,6205..6263,7424..7577)] [gbkey=CDS]
Sequence

ATGAATGAGAAGGCCAACGTTACAAAGGAACTCAATGCCAAGCACAGAAAGATATTGGAA
GGACTCCTTAAGTTGCCAGAGAACAGGGAGTGTGCAGATTGTAAAGCCAAAGGTCCTCGA
TGGGCAAGTGTGAATCTGGGGATCTTCATATGCATGCAATGCTCCGGAATCCACAGAAGT
CTAGGGGTACACATTTCAAAGGTTCGATCAGCTACTTTAGATACATGGCTTCCTGAACAA
GTTGCATTTATTCGATCAATGGGAAATGAGAAGGCAAATAGTTATTGGGAAGCGGAGCTT
CCTCCAAATTATGATAGAGCTGGTATTGAGAATTTCATCCGTGCAAAGTATGAAGACAAG
AGGTGGATCCCAAAGAATGGGAAGGAAAAATCAGTTTCCAAGGTTCAAGAAGAGTTGGCC
ACAGTGCAACGGCAACAACGTTGTGACAGAACTGTCCATGAATCCGGTGGTTCGTCTGAT
GAGAGGATAAGCATACAACGCCCTAGCATAAAGCAAGATATACCTTCTGCTAGATTCAGT
ATACCTCTGCCTCCAAAAGCACCAGAGCAAACAAGTCAGAAGACACAACCAATTGCAGTC
ACTGAATCTGCAAAGCAGGTTGCAGAAGTTGCCGATCCTCCTAAAGTTGATATTGCTACT
GATCTTTTCGACATTCTTTCTATGGATGCTCCAAATGACAATGGCGCAGATGCTGCTTCT
GTAGATGATATCTCGTGGAAAGGTTTCCAATCTTCTCAAGAAGCAATGGCAGCAGCAAAA
ACTGGTGTTGCAAGATCTGATCATCGGAAATCCCAATCTGCTTCTGCAGTTGAAGATTTA
TTCAAGGATTCACCATCATTGCCATCGTCAATTTCAACTTCTTCCTTGTCAGAGAAGCTT
CCAAAAGATGTAAAAAATGATATCATGAGCCTTTTTGACAAGTCCAATACGGTGTCACCA
TTTGCCATGCATCAGCAACAAATTTGCCAGCTAGCTCAACAACAGTCTCTTCTAATGGCT
GCTGCCGCTGCTAGTGGCACTTTAAAAATCCCCGTGGATGTTCAACAAGGACCAAATGGC
TCCAATATAGTGAATCAAAGTTGGCCAAATGTAGGCTACCAGTTCCCTGGAATGACGATG
CCAGCCAGTGGAAAGACTGAACTGGAGAATTATTTGCAGGTGGGCACTGGGGGAGCAACA
CATTTAGCTGGAAACTCTGTCCCTCTTTCAACATCCAGTGTTTACCCAACGGGACAGAAT
TCTTCGGGCAATGGTACAGTCCCCTCTGTACCGAGCACAGATGCAGCAACCACACTTTCA
TCAAGTTCTACACAATCCACAAAAGAGTACGATTTCTCGTCTTTGACTCAAGGCATGTTC
TCGAAACGCTGA

Peptide Sequence

PEP ID

XP_016453766.1
PEP Infomation

PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3 [Nicotiana tabacum]
Sequence

MNEKANVTKELNAKHRKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRS
LGVHISKVRSATLDTWLPEQVAFIRSMGNEKANSYWEAELPPNYDRAGIENFIRAKYEDK
RWIPKNGKEKSVSKVQEELATVQRQQRCDRTVHESGGSSDERISIQRPSIKQDIPSARFS
IPLPPKAPEQTSQKTQPIAVTESAKQVAEVADPPKVDIATDLFDILSMDAPNDNGADAAS
VDDISWKGFQSSQEAMAAAKTGVARSDHRKSQSASAVEDLFKDSPSLPSSISTSSLSEKL
PKDVKNDIMSLFDKSNTVSPFAMHQQQICQLAQQQSLLMAAAAASGTLKIPVDVQQGPNG
SNIVNQSWPNVGYQFPGMTMPASGKTELENYLQVGTGGATHLAGNSVPLSTSSVYPTGQN
SSGNGTVPSVPSTDAATTLSSSSTQSTKEYDFSSLTQGMFSKR

Transcript Sequence

Gene sequence data has not been registered.